Refactor ASM3 module to export ASM_CONSTANTS and update references in Reactor classes
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@@ -1,4 +1,9 @@
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const math = require('mathjs')
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const math = require('mathjs');
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const ASM_CONSTANTS = {
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S_O_INDEX: 0,
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NUM_SPECIES: 13
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};
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/**
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* ASM3 class for the Activated Sludge Model No. 3 (ASM3). Using Koch et al. 2000 parameters.
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@@ -208,4 +213,4 @@ class ASM3 {
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}
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}
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module.exports = ASM3;
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module.exports = { ASM3, ASM_CONSTANTS };
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@@ -1,4 +1,9 @@
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const math = require('mathjs')
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const math = require('mathjs');
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const ASM_CONSTANTS = {
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S_O_INDEX: 0,
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NUM_SPECIES: 13
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};
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/**
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* ASM3 class for the Activated Sludge Model No. 3 (ASM3).
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@@ -208,4 +213,4 @@ class ASM3 {
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}
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}
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module.exports = ASM3;
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module.exports = { ASM3, ASM_CONSTANTS };
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@@ -1,4 +1,4 @@
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const ASM3 = require('./reaction_modules/asm3_class.js');
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const { ASM3, ASM_CONSTANTS } = require('./reaction_modules/asm3_class.js');
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const { create, all, isArray, i } = require('mathjs');
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const { assertNoNaN } = require('./utils.js');
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const { childRegistrationUtils, logger, MeasurementContainer } = require('generalFunctions');
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@@ -10,8 +10,6 @@ const mathConfig = {
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const math = create(all, mathConfig);
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const S_O_INDEX = 0;
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const NUM_SPECIES = 13;
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const BC_PADDING = 2;
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const DEBUG = false;
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const DAY2MS = 1000 * 60 * 60 * 24;
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@@ -39,7 +37,7 @@ class Reactor {
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this.volume = config.volume; // fluid volume reactor [m3]
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this.Fs = [0]; // fluid debits per inlet [m3 d-1]
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this.Cs_in = [Array(NUM_SPECIES).fill(0)]; // composition influents
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this.Cs_in = [Array(ASM_CONSTANTS.NUM_SPECIES).fill(0)]; // composition influents
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this.OTR = 0.0; // oxygen transfer rate [g O2 d-1 m-3]
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this.temperature = 20; // temperature [C]
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@@ -59,7 +57,7 @@ class Reactor {
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if (this.Fs.length <= i_in) {
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this.logger.debug(`Adding new inlet index ${i_in}.`);
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this.Fs.push(0);
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this.Cs_in.push(Array(NUM_SPECIES).fill(0));
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this.Cs_in.push(Array(ASM_CONSTANTS.NUM_SPECIES).fill(0));
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this.setInfluent = input;
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}
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this.Fs[i_in] = input.payload.F;
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@@ -243,8 +241,8 @@ class Reactor_CSTR extends Reactor {
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const inflow = math.multiply(math.divide([this.Fs], this.volume), this.Cs_in)[0];
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const outflow = math.multiply(-1 * math.sum(this.Fs) / this.volume, this.state);
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const reaction = this.asm.compute_dC(this.state, this.temperature);
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const transfer = Array(NUM_SPECIES).fill(0.0);
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transfer[S_O_INDEX] = isNaN(this.kla) ? this.OTR : this._calcOTR(this.state[S_O_INDEX], this.temperature); // calculate OTR if kla is not NaN, otherwise use externaly calculated OTR
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const transfer = Array(ASM_CONSTANTS.NUM_SPECIES).fill(0.0);
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transfer[ASM_CONSTANTS.S_O_INDEX] = isNaN(this.kla) ? this.OTR : this._calcOTR(this.state[S_O_INDEX], this.temperature); // calculate OTR if kla is not NaN, otherwise use externaly calculated OTR
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const dC_total = math.multiply(math.add(inflow, outflow, reaction, transfer), time_step)
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this.state = this._arrayClip2Zero(math.add(this.state, dC_total)); // clip value element-wise to avoid negative concentrations
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@@ -273,7 +271,7 @@ class Reactor_PFR extends Reactor {
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this.alpha = config.alpha;
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this.state = Array.from(Array(this.n_x), () => config.initialState.slice());
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this.extendedState = Array.from(Array(this.n_x + 2*BC_PADDING), () => new Array(NUM_SPECIES).fill(0));
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this.extendedState = Array.from(Array(this.n_x + 2*BC_PADDING), () => new Array(ASM_CONSTANTS.NUM_SPECIES).fill(0));
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// initialise extended state
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this.state.forEach((row, i) => this.extendedState[i+BC_PADDING] = row);
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@@ -324,15 +322,15 @@ class Reactor_PFR extends Reactor {
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const dispersion = math.multiply(this.D / (this.d_x*this.d_x), this.D2_op, this.extendedState);
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const advection = math.multiply(-1 * math.sum(this.Fs) / (this.A*this.d_x), this.D_op, this.extendedState);
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const reaction = this.extendedState.map((state_slice) => this.asm.compute_dC(state_slice, this.temperature));
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const transfer = Array.from(Array(this.n_x+2*BC_PADDING), () => new Array(NUM_SPECIES).fill(0));
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const transfer = Array.from(Array(this.n_x+2*BC_PADDING), () => new Array(ASM_CONSTANTS.NUM_SPECIES).fill(0));
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if (isNaN(this.kla)) { // calculate OTR if kla is not NaN, otherwise use externally calculated OTR
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for (let i = BC_PADDING+1; i < BC_PADDING+this.n_x - 1; i++) {
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transfer[i][S_O_INDEX] = this.OTR * this.n_x/(this.n_x-2);
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transfer[i][ASM_CONSTANTS.S_O_INDEX] = this.OTR * this.n_x/(this.n_x-2);
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}
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} else {
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for (let i = BC_PADDING+1; i < BC_PADDING+this.n_x - 1; i++) {
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transfer[i][S_O_INDEX] = this._calcOTR(this.extendedState[i][S_O_INDEX], this.temperature) * this.n_x/(this.n_x-2);
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transfer[i][ASM_CONSTANTS.S_O_INDEX] = this._calcOTR(this.extendedState[i][ASM_CONSTANTS.S_O_INDEX], this.temperature) * this.n_x/(this.n_x-2);
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}
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}
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@@ -357,7 +355,7 @@ class Reactor_PFR extends Reactor {
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switch(measurementType) {
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case "quantity (oxygen)":
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let grid_pos = Math.round(context.distance / this.config.length * this.n_x);
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this.state[grid_pos][S_O_INDEX] = value; // naive approach for reconciling measurements and simulation
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this.state[grid_pos][0] = value; // naive approach for reconciling measurements and simulation
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break;
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default:
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super._updateMeasurement(measurementType, value, position, context);
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